EnhancerDB
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  3. rs376506500[chr17:56013339]
Enhancers that have rs376506500[chr17:56013339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs376506500[chr17:56013339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56012805 56013405 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21773885
chr17 56012805 56013405 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274780
chr17 56012805 56013405 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274781
chr17 56012939 56013555 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773896
chr17 56012939 56013555 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274793
chr17 56012939 56013555 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274794
chr17 56013183 56013499 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773899
chr17 56013183 56013499 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274797
chr17 56013332 56013353 REST JASPAR yes 21261431
chr17 56013332 56013353 REST JASPAR yes 55001699
chr17 56013333 56013352 REST JASPAR yes 21261432
chr17 56013333 56013352 REST JASPAR yes 55001700
chr17 56013336 56013340 NFE TRANSFAC yes 55001701
Genes associated with rs376506500[chr17:56013339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More