EnhancerDB
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  3. rs376765655[chr6:29935540]
Enhancers that have rs376765655[chr6:29935540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr6 29935319 29935652 vista51502
VISTA
Transcript factors that have rs376765655[chr6:29935540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29935295 29936003 GATA1 UCSC Txn Factor no Conserved 108539463
chr6 29935347 29935637 NR2F2 UCSC Txn Factor no Conserved 108539464
chr6 29935363 29935597 TEAD4 UCSC Txn Factor no Conserved 108539465
chr6 29935375 29935604 TAL1 UCSC Txn Factor no Conserved 108539466
chr6 29935530 29935542 GRHL1 JASPAR yes 70342175
chr6 29935530 29935542 GRHL1 JASPAR yes 101019025
chr6 29935531 29935541 TFCP2 JASPAR yes 70342176
chr6 29935531 29935541 TFCP2 JASPAR yes 101019026
chr6 29935533 29935543 HMBOX1 JASPAR yes 70342177
chr6 29935533 29935543 HMBOX1 JASPAR yes 101019027
chr6 29935539 29935545 TBP TRANSFAC yes 70342178
chr6 29935539 29935545 TBP TRANSFAC yes 101019028
Genes associated with rs376765655[chr6:29935540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More