EnhancerDB
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  3. rs376773729[chr19:2616477]
Enhancers that have rs376773729[chr19:2616477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs376773729[chr19:2616477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2616469 2616479 HOXA13 JASPAR yes 112083651
chr19 2616470 2616485 FOXP1 JASPAR yes 112083652
chr19 2616473 2616479 TBP TRANSFAC yes 112083653
chr19 2616474 2616489 FOXP1 JASPAR yes 112083654
chr19 2616475 2616486 FOXA1 JASPAR yes 112083655
chr19 2616475 2616490 FOXA1 JASPAR yes 112083656
chr19 2616476 2616488 FOXC2 JASPAR yes 112083657
chr19 2616477 2616489 FOXI1 JASPAR yes 112083658
Genes associated with rs376773729[chr19:2616477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More