EnhancerDB
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  3. rs376800468[chr1:19757209]
Enhancers that have rs376800468[chr1:19757209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs376800468[chr1:19757209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19757198 19757210 ZBTB7A JASPAR yes 27189198
chr1 19757203 19757214 GCM1 JASPAR yes 27189200
chr1 19757204 19757214 GCM2 JASPAR yes 27189201
chr1 19757209 19757220 GCM1 JASPAR yes 27189202
Genes associated with rs376800468[chr1:19757209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More