EnhancerDB
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  3. rs3768378[chr1:226847742]
Enhancers that have rs3768378[chr1:226847742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3768378[chr1:226847742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226847731 226847749 TP53 JASPAR yes 35828974
chr1 226847740 226847744 LFA1 TRANSFAC yes 35828975
chr1 226847742 226847754 FOXI1 JASPAR yes 35828976
Genes associated with rs3768378[chr1:226847742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More