EnhancerDB
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  3. rs3768400[chr1:226885394]
Enhancers that have rs3768400[chr1:226885394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3768400[chr1:226885394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226884698 226885856 ZNF274 GTRD no Blood (GM12878) 21387213
chr1 226884698 226885856 ZNF274 GTRD no Blood (GM12878) 107876248
chr1 226884719 226885880 ZNF274 GTRD no Blood (GM12878) 21387214
chr1 226884719 226885880 ZNF274 GTRD no Blood (GM12878) 107876249
chr1 226884793 226886619 ZNF274 GTRD no Blood (GM12878) 21387215
chr1 226884793 226886619 ZNF274 GTRD no Blood (GM12878) 107876251
chr1 226884882 226885478 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387219
chr1 226884882 226885478 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107876255
chr1 226884961 226885505 ZNF143 GTRD no Epithelial (MCF-7) 21387223
chr1 226884961 226885505 ZNF143 GTRD no Epithelial (MCF-7) 107876259
chr1 226885017 226885889 TCF7L2 GTRD no Colon (HCT116) 21387224
chr1 226885017 226885889 TCF7L2 GTRD no Colon (HCT116) 107876260
chr1 226885018 226885708 ZNF143 GTRD no Epithelial (MCF-7) 21387225
chr1 226885018 226885708 ZNF143 GTRD no Epithelial (MCF-7) 107876261
chr1 226885047 226885458 ZNF143 GTRD no Epithelial (MCF-7) 21387227
chr1 226885047 226885458 ZNF143 GTRD no Epithelial (MCF-7) 107876263
chr1 226885089 226885632 TCF7L2 GTRD no Colon (HCT116) 21387228
chr1 226885089 226885632 TCF7L2 GTRD no Colon (HCT116) 107876264
chr1 226885093 226885722 ZNF274 GTRD no Blood (GM12878) 21387230
chr1 226885093 226885722 ZNF274 GTRD no Blood (GM12878) 107876267
Genes associated with rs3768400[chr1:226885394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More