EnhancerDB
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  3. rs376980590[chr1:234625052]
Enhancers that have rs376980590[chr1:234625052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs376980590[chr1:234625052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 21393179
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 107879987
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 107879988
chr1 234624018 234625466 ZNF274 GTRD no Bone Marrow (K562) 21393190
chr1 234624018 234625466 ZNF274 GTRD no Bone Marrow (K562) 107879999
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 21393194
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 107880003
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 107880004
chr1 234624262 234625332 ZNF274 GTRD no Bone Marrow (K562) 21393202
chr1 234624358 234625542 AR GTRD no Prostate (PC-3) 21393203
chr1 234624358 234625542 AR GTRD no Prostate (PC-3) 107880005
chr1 234624504 234625387 ZBTB33 GTRD no Brain (SK-N-SH) 21393206
chr1 234624529 234625296 ZNF274 GTRD no Bone Marrow (K562) 21393207
chr1 234624538 234625332 ZNF274 GTRD no Bone Marrow (K562) 21393208
chr1 234624541 234625212 ZBTB33 GTRD no Brain (SK-N-SH) 21393209
chr1 234624598 234625187 ZBTB33 GTRD no Brain (SK-N-SH) 21393210
chr1 234624624 234625278 ZNF274 GTRD no Cervix (HeLa-S3) 21393211
chr1 234624628 234625206 ZBTB33 GTRD no Brain (SK-N-SH) 21393212
chr1 234624637 234625161 ZNF274 GTRD no Bone Marrow (K562) 21393213
chr1 234624657 234625264 ZNF274 GTRD no Bone Marrow (K562) 21393214
chr1 234624672 234625205 ZBTB33 GTRD no Brain (SK-N-SH) 21393215
chr1 234624676 234625293 ZBTB33 GTRD no Brain (SK-N-SH) 21393216
chr1 234624721 234625124 ZNF274 GTRD no Bone Marrow (K562) 21393217
chr1 234624721 234625126 ZNF274 GTRD no Bone Marrow (K562) 21393218
chr1 234624727 234625153 ZNF143 GTRD no Epithelial (MCF-7) 21393219
chr1 234624782 234625114 ZNF274 GTRD no Blood (GM12878) 21393220
chr1 234624835 234625161 ZNF143 GTRD no Epithelial (MCF-7) 21393221
chr1 234625041 234625052 STAT3 JASPAR yes 36277849
Genes associated with rs376980590[chr1:234625052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More