EnhancerDB
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  3. rs377050485[chr19:4378229]
Enhancers that have rs377050485[chr19:4378229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs377050485[chr19:4378229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4375768 4378389 TCF7L2 GTRD no Colon (HCT116) 21841327
chr19 4375768 4378389 TCF7L2 GTRD no Colon (HCT116) 108371811
chr19 4378221 4378235 TCF7L2 JASPAR yes 112170211
Genes associated with rs377050485[chr19:4378229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More