EnhancerDB
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  3. rs377244727[chr1:39622184]
Enhancers that have rs377244727[chr1:39622184]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs377244727[chr1:39622184]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39622177 39622191 GLIS3 JASPAR yes 28259788
chr1 39622183 39622197 PLAG1 JASPAR yes 28259789
chr1 39622183 39622198 NR2C2 JASPAR yes 28259790
Genes associated with rs377244727[chr1:39622184], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More