EnhancerDB
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  3. rs377532954[chr17:42172913]
Enhancers that have rs377532954[chr17:42172913]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs377532954[chr17:42172913]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42172773 42173349 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261848
chr17 42172773 42173349 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261849
chr17 42172797 42173157 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761801
chr17 42172797 42173157 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261850
chr17 42172841 42173165 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261851
chr17 42172880 42173420 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261852
chr17 42172880 42173420 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261853
chr17 42172882 42173158 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761802
chr17 42172882 42173158 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261854
chr17 42172899 42173235 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761803
chr17 42172899 42173235 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261855
chr17 42172904 42172918 PLAG1 JASPAR yes 54386319
chr17 42172904 42172925 ZNF263 JASPAR yes 54386320
chr17 42172904 42173228 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261856
chr17 42172905 42173215 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261857
chr17 42172905 42173275 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761804
chr17 42172905 42173275 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261858
chr17 42172906 42172921 TFAP2A JASPAR yes 54386321
chr17 42172906 42172921 TFAP2C JASPAR yes 54386322
chr17 42172907 42173243 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108261859
chr17 42172907 42173854 POLR2A UCSC Txn Factor no Conserved 108261860
chr17 42172907 42173854 POLR2A UCSC Txn Factor no Conserved 108261861
chr17 42172908 42172917 TFAP2A JASPAR yes 54386323
chr17 42172913 42172923 SP1 JASPAR yes 54386324
Genes associated with rs377532954[chr17:42172913], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More