EnhancerDB
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  3. rs3778169[chr6:11201902]
Enhancers that have rs3778169[chr6:11201902]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3778169[chr6:11201902]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11201896 11201904 FOXL1 JASPAR yes 99863358
chr6 11201901 11201905 NFE TRANSFAC yes 99863359
chr6 11201901 11201906 GATA1 TRANSFAC yes 99863360
chr6 11201901 11201907 GATA3 JASPAR yes 99863361
Genes associated with rs3778169[chr6:11201902], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More