EnhancerDB
  1. Home
  2. SNP
  3. rs3798736[chr6:11201527]
Enhancers that have rs3798736[chr6:11201527]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3798736[chr6:11201527]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11201524 11201536 PKNOX1 JASPAR yes 99863304
chr6 11201524 11201536 TGIF1 JASPAR yes 99863305
chr6 11201524 11201536 TGIF2 JASPAR yes 99863306
Genes associated with rs3798736[chr6:11201527], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More