EnhancerDB
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  3. rs3805939[chr6:43058736]
Enhancers that have rs3805939[chr6:43058736]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43045645 43067063 enh23249
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs3805939[chr6:43058736]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43058722 43058742 ESR1 JASPAR yes 101752679
chr6 43058725 43058743 ESR1 JASPAR yes 101752681
chr6 43058725 43058743 ESR2 JASPAR yes 101752682
chr6 43058725 43058745 PPARG JASPAR yes 101752683
chr6 43058727 43058742 ESR2 JASPAR yes 101752685
chr6 43058727 43058747 ESR1 JASPAR yes 101752686
chr6 43058736 43058739 MYB TRANSFAC yes 101752688
Genes associated with rs3805939[chr6:43058736], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More