EnhancerDB
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  3. rs3805940[chr6:43058632]
Enhancers that have rs3805940[chr6:43058632]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43045645 43067063 enh23249
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs3805940[chr6:43058632]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43058615 43058636 IRF1 JASPAR yes 101752668
chr6 43058618 43058638 RREB1 JASPAR yes 101752671
chr6 43058619 43058640 IRF1 JASPAR yes 101752672
chr6 43058620 43058635 FOXP1 JASPAR yes 101752673
chr6 43058623 43058643 RREB1 JASPAR yes 101752674
chr6 43058630 43058636 TCF4 TRANSFAC yes 101752675
Genes associated with rs3805940[chr6:43058632], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More