EnhancerDB
  1. Home
  2. SNP
  3. rs3813436[chr17:855005]
Enhancers that have rs3813436[chr17:855005]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs3813436[chr17:855005]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 854999 855007 SP1 TRANSFAC yes 52644421
chr17 855000 855005 SP1 TRANSFAC yes 52644422
chr17 855001 855006 SP1 TRANSFAC yes 52644423
chr17 855001 855010 THAP1 JASPAR yes 52644424
chr17 855004 855008 LFA1 TRANSFAC yes 52644425
Genes associated with rs3813436[chr17:855005], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More