EnhancerDB
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  3. rs3819402[chr6:16399890]
Enhancers that have rs3819402[chr6:16399890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16389708 16416819 enh8977
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs3819402[chr6:16399890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16399888 16399898 ID4 JASPAR yes 100296783
chr6 16399888 16399898 TCF4 JASPAR yes 100296784
chr6 16399890 16399895 USF2 TRANSFAC yes 100296785
chr6 16399890 16399902 EHF JASPAR yes 100296786
Genes associated with rs3819402[chr6:16399890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More