EnhancerDB
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  3. rs3820641[chr1:226871809]
Enhancers that have rs3820641[chr1:226871809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3820641[chr1:226871809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226869466 226871812 ZNF274 GTRD no Bone Marrow (K562) 107875964
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875965
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875966
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875967
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875968
chr1 226869856 226871985 ZNF274 GTRD no Cervix (HeLa-S3) 21387085
chr1 226869856 226871985 ZNF274 GTRD no Cervix (HeLa-S3) 107875971
chr1 226869859 226871870 ZBTB33 GTRD no Lung (A549) 107875972
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 21387087
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 107875974
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 107875975
chr1 226869951 226871924 ZNF274 GTRD no Liver (HepG2) 107875980
chr1 226869971 226871827 ZNF143 GTRD no Epithelial (MCF-7) 21387091
chr1 226869971 226871827 ZNF143 GTRD no Epithelial (MCF-7) 107875985
chr1 226870015 226871927 ZNF274 GTRD no Bone Marrow (K562) 107875993
chr1 226870040 226871899 ZNF274 GTRD no Bone Marrow (K562) 107876002
chr1 226870088 226871844 ZNF143 GTRD no Epithelial (MCF-7) 21387107
chr1 226870088 226871844 ZNF143 GTRD no Epithelial (MCF-7) 107876025
chr1 226871537 226872715 ZNF274 GTRD no Bone Marrow (K562) 107876168
chr1 226871547 226872330 TCF7L2 GTRD no Colon (HCT116) 21387185
chr1 226871547 226872330 TCF7L2 GTRD no Colon (HCT116) 107876169
chr1 226871808 226872367 ZNF274 GTRD no Bone Marrow (K562) 107876170
Genes associated with rs3820641[chr1:226871809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More