EnhancerDB
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  3. rs3825253[chr12:109109281]
Enhancers that have rs3825253[chr12:109109281]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109103554 109121615 enh14974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3825253[chr12:109109281]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109109277 109109281 H1TF2 TRANSFAC yes 123615438
chr12 109109277 109109281 NFE TRANSFAC yes 123615439
chr12 109109277 109109281 SRF TRANSFAC yes 123615440
Genes associated with rs3825253[chr12:109109281], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More