EnhancerDB
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  3. rs383971[chr1:229353590]
Enhancers that have rs383971[chr1:229353590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs383971[chr1:229353590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229353535 229353811 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390741
chr1 229353558 229354088 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390742
chr1 229353564 229354080 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390743
chr1 229353590 229353601 FOXA1 JASPAR yes 35975553
chr1 229353590 229353605 FOXA1 JASPAR yes 35975554
Genes associated with rs383971[chr1:229353590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More