EnhancerDB
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  3. rs3856254[chr1:41883722]
Enhancers that have rs3856254[chr1:41883722]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3856254[chr1:41883722]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41883708 41883723 PRDM1 JASPAR yes 28387772
chr1 41883709 41883730 ZNF263 JASPAR yes 28387773
chr1 41883710 41883731 IRF1 JASPAR yes 28387774
chr1 41883712 41883733 ZNF263 JASPAR yes 28387775
chr1 41883714 41883728 SPI1 JASPAR yes 28387776
chr1 41883714 41883728 SPIC JASPAR yes 28387777
chr1 41883714 41883732 IRF2 JASPAR yes 28387778
chr1 41883716 41883728 ELF4 JASPAR yes 28387779
chr1 41883718 41883728 ETV6 JASPAR yes 28387780
chr1 41883718 41883728 GABPA JASPAR yes 28387781
chr1 41883720 41883726 ETS1 JASPAR yes 28387782
chr1 41883720 41883726 SPI1 JASPAR yes 28387783
Genes associated with rs3856254[chr1:41883722], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More