EnhancerDB
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  3. rs3858205[chr10:21653816]
Enhancers that have rs3858205[chr10:21653816]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3858205[chr10:21653816]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21653627 21654103 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21421025
chr10 21653627 21654154 ZNF274 GTRD no Bone Marrow (K562) 21421026
chr10 21653789 21654133 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21421027
chr10 21653812 21653822 NFKB1 JASPAR yes 125902084
chr10 21653812 21653823 NFKB1 JASPAR yes 125902085
chr10 21653813 21653823 RELA JASPAR yes 125902086
chr10 21653813 21653823 REL JASPAR yes 125902087
chr10 21653814 21653824 HINFP JASPAR yes 125902088
Genes associated with rs3858205[chr10:21653816], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More