EnhancerDB
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  3. rs3873283[chr6:29933000]
Enhancers that have rs3873283[chr6:29933000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs3873283[chr6:29933000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29932198 29933028 GATA2 UCSC Txn Factor no Conserved 108539441
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539442
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539443
chr6 29932489 29933173 PML UCSC Txn Factor no Conserved 108539444
chr6 29932520 29933060 EP300 UCSC Txn Factor no Conserved 108539445
chr6 29932537 29933133 TCF7L2 UCSC Txn Factor no Conserved 108539446
chr6 29932572 29933028 JUND UCSC Txn Factor no Conserved 108539447
chr6 29932622 29933009 TAF1 UCSC Txn Factor no Conserved 108539450
chr6 29932686 29933002 EBF1 UCSC Txn Factor no Conserved 108539458
chr6 29932990 29933005 STAT2 JASPAR yes 101018662
Genes associated with rs3873283[chr6:29933000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More