EnhancerDB
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  3. rs3886440[chr11:12710569]
Enhancers that have rs3886440[chr11:12710569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12695618 12731895 enh13785
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3886440[chr11:12710569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12710548 12710569 IRF1 JASPAR yes 37465077
chr11 12710554 12710575 IRF1 JASPAR yes 37465078
chr11 12710555 12710570 FOXP1 JASPAR yes 37465079
chr11 12710555 12710576 IRF1 JASPAR yes 37465080
chr11 12710556 12710571 STAT2 JASPAR yes 37465082
chr11 12710557 12710572 FOXP1 JASPAR yes 37465083
chr11 12710558 12710578 RREB1 JASPAR yes 37465084
chr11 12710560 12710575 FOXP1 JASPAR yes 37465085
chr11 12710567 12710573 TCF4 TRANSFAC yes 37465086
chr11 12710569 12710589 RREB1 JASPAR yes 37465087
Genes associated with rs3886440[chr11:12710569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More