EnhancerDB
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  3. rs3893463[chr6:29935405]
Enhancers that have rs3893463[chr6:29935405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr6 29935319 29935652 vista51502
VISTA
Transcript factors that have rs3893463[chr6:29935405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29935295 29936003 GATA1 UCSC Txn Factor no Conserved 108539463
chr6 29935347 29935637 NR2F2 UCSC Txn Factor no Conserved 108539464
chr6 29935363 29935597 TEAD4 UCSC Txn Factor no Conserved 108539465
chr6 29935375 29935604 TAL1 UCSC Txn Factor no Conserved 108539466
chr6 29935400 29935415 RFX5 JASPAR yes 70342114
chr6 29935400 29935415 RFX5 JASPAR yes 101018964
chr6 29935403 29935423 TBX19 JASPAR yes 70342115
chr6 29935403 29935423 TBX19 JASPAR yes 101018965
chr6 29935405 29935421 T JASPAR yes 70342116
chr6 29935405 29935421 T JASPAR yes 101018966
Genes associated with rs3893463[chr6:29935405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More