EnhancerDB
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  3. rs3934578[chr1:183027216]
Enhancers that have rs3934578[chr1:183027216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183006465 183034735 enh801
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs3934578[chr1:183027216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183027206 183027220 IRF8 JASPAR yes 33651449
chr1 183027208 183027229 IRF1 JASPAR yes 33651450
chr1 183027209 183027224 LEF1 JASPAR yes 33651451
chr1 183027210 183027224 TCF7L2 JASPAR yes 33651452
chr1 183027215 183027230 FOXA1 JASPAR yes 33651453
chr1 183027216 183027228 FOXI1 JASPAR yes 33651454
Genes associated with rs3934578[chr1:183027216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More