EnhancerDB
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  3. rs3936999[chr11:64626239]
Enhancers that have rs3936999[chr11:64626239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 64622205 64642835 enh1820
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 64625998 64626454 vista10578
VISTA
Transcript factors that have rs3936999[chr11:64626239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 64625916 64626286 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21490346
chr11 64625916 64626286 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107976849
chr11 64625929 64626285 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21490347
chr11 64625929 64626285 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107976850
chr11 64625934 64626304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21490348
chr11 64625934 64626304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107976851
chr11 64626231 64626246 HNF4G JASPAR yes 39286680
chr11 64626231 64626246 HNF4G JASPAR yes 114084343
chr11 64626235 64626241 LEF1 TRANSFAC yes 39286681
chr11 64626235 64626241 SOX10 JASPAR yes 39286682
chr11 64626235 64626241 LEF1 TRANSFAC yes 114084344
chr11 64626235 64626241 SOX10 JASPAR yes 114084345
Genes associated with rs3936999[chr11:64626239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More