EnhancerDB
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  3. rs395065[chr6:16404580]
Enhancers that have rs395065[chr6:16404580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16389708 16416819 enh8977
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs395065[chr6:16404580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16404573 16404594 IRF1 JASPAR yes 100297488
chr6 16404577 16404589 IRF1 JASPAR yes 100297489
chr6 16404579 16404585 TCF4 TRANSFAC yes 100297490
chr6 16404579 16404594 FOXP1 JASPAR yes 100297491
chr6 16404579 16404600 IRF1 JASPAR yes 100297492
chr6 16404580 16404589 SRY JASPAR yes 100297493
chr6 16404580 16404591 FOXP2 JASPAR yes 100297494
chr6 16404580 16404592 FOXC2 JASPAR yes 100297495
Genes associated with rs395065[chr6:16404580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More