EnhancerDB
  1. Home
  2. SNP
  3. rs397688472[chr3:58032182]
Enhancers that have rs397688472[chr3:58032182]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397688472[chr3:58032182]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58032175 58032189 ONECUT3 JASPAR yes 2668922
chr3 58032177 58032192 FOXP1 JASPAR yes 2668923
chr3 58032178 58032187 SRY JASPAR yes 2668924
chr3 58032178 58032190 FOXC2 JASPAR yes 2668925
chr3 58032179 58032194 FOXP1 JASPAR yes 2668926
chr3 58032181 58032196 FOXP1 JASPAR yes 2668927
chr3 58032182 58032197 FOXP1 JASPAR yes 2668928
Genes associated with rs397688472[chr3:58032182], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More