EnhancerDB
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  3. rs397690902[chr15:42235015]
Enhancers that have rs397690902[chr15:42235015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397690902[chr15:42235015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42235004 42235018 ZIC1 JASPAR yes 23008330
chr15 42235004 42235019 ZIC3 JASPAR yes 23008331
chr15 42235004 42235019 ZIC4 JASPAR yes 23008332
chr15 42235010 42235019 SOX9 JASPAR yes 23008333
chr15 42235011 42235026 FOXP1 JASPAR yes 23008334
chr15 42235012 42235021 SRY JASPAR yes 23008335
chr15 42235012 42235023 FOXP2 JASPAR yes 23008336
chr15 42235012 42235026 FOXF2 JASPAR yes 23008337
chr15 42235013 42235021 FOXD1 JASPAR yes 23008338
chr15 42235013 42235021 FOXG1 JASPAR yes 23008339
chr15 42235013 42235021 FOXO3 JASPAR yes 23008340
chr15 42235014 42235021 FOXD2 JASPAR yes 23008341
chr15 42235014 42235021 FOXI1 JASPAR yes 23008342
chr15 42235014 42235021 FOXL1 JASPAR yes 23008343
chr15 42235014 42235021 FOXO4 JASPAR yes 23008344
chr15 42235014 42235021 FOXO6 JASPAR yes 23008345
chr15 42235014 42235021 FOXP3 JASPAR yes 23008346
chr15 42235014 42235022 FOXO3 JASPAR yes 23008347
chr15 42235014 42235035 ZNF263 JASPAR yes 23008348
Genes associated with rs397690902[chr15:42235015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More