EnhancerDB
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  3. rs397719428[chr17:41479337]
Enhancers that have rs397719428[chr17:41479337]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397719428[chr17:41479337]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41478758 41479663 ZNF143 GTRD no Epithelial (MCF-7) 108261338
chr17 41478793 41479643 ZNF143 GTRD no Epithelial (MCF-7) 108261339
chr17 41478846 41479649 TCF7L2 GTRD no Colon (HCT116) 108261341
chr17 41479330 41479351 IRF1 JASPAR yes 54342128
chr17 41479331 41479346 FOXP1 JASPAR yes 54342129
chr17 41479333 41479348 FOXP1 JASPAR yes 54342130
chr17 41479335 41479350 FOXP1 JASPAR yes 54342131
Genes associated with rs397719428[chr17:41479337], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More