EnhancerDB
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  3. rs397731798[chr3:124559509]
Enhancers that have rs397731798[chr3:124559509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397731798[chr3:124559509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124559493 124559514 IRF1 JASPAR yes 5406455
chr3 124559499 124559520 IRF1 JASPAR yes 5406456
chr3 124559501 124559516 PRDM1 JASPAR yes 5406457
chr3 124559501 124559516 STAT2 JASPAR yes 5406458
chr3 124559502 124559516 SPIC JASPAR yes 5406459
chr3 124559502 124559516 STAT1 JASPAR yes 5406460
chr3 124559503 124559524 IRF1 JASPAR yes 5406461
chr3 124559504 124559519 FOXP1 JASPAR yes 5406462
chr3 124559506 124559521 FOXP1 JASPAR yes 5406463
chr3 124559508 124559523 FOXP1 JASPAR yes 5406464
chr3 124559509 124559524 FOXP1 JASPAR yes 5406465
Genes associated with rs397731798[chr3:124559509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More