EnhancerDB
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  3. rs397734944[chr16:88845444]
Enhancers that have rs397734944[chr16:88845444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397734944[chr16:88845444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88845436 88845450 SPI1 JASPAR yes 12303505
chr16 88845438 88845459 IRF1 JASPAR yes 12303506
chr16 88845440 88845455 PRDM1 JASPAR yes 12303507
chr16 88845440 88845455 STAT2 JASPAR yes 12303508
chr16 88845440 88845461 IRF1 JASPAR yes 12303509
chr16 88845443 88845458 FOXP1 JASPAR yes 12303510
chr16 88845444 88845459 FOXP1 JASPAR yes 12303511
Genes associated with rs397734944[chr16:88845444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More