EnhancerDB
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  3. rs397749490[chr6:44056857]
Enhancers that have rs397749490[chr6:44056857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397749490[chr6:44056857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44056838 44056859 IRF1 JASPAR yes 101822998
chr6 44056842 44056857 IRF9 JASPAR yes 101823003
chr6 44056843 44056861 IRF2 JASPAR yes 101823004
chr6 44056844 44056865 IRF1 JASPAR yes 101823005
chr6 44056849 44056864 FOXP1 JASPAR yes 101823006
chr6 44056852 44056873 ZNF263 JASPAR yes 101823007
chr6 44056854 44056868 IRF7 JASPAR yes 101823008
chr6 44056856 44056862 TCF4 TRANSFAC yes 101823009
chr6 44056856 44056871 FOXP1 JASPAR yes 101823010
chr6 44056857 44056866 SRY JASPAR yes 101823011
chr6 44056857 44056868 FOXP2 JASPAR yes 101823012
Genes associated with rs397749490[chr6:44056857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More