EnhancerDB
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  3. rs397755828[chr5:77799523]
Enhancers that have rs397755828[chr5:77799523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs397755828[chr5:77799523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77799520 77799535 FOXP1 JASPAR yes 63593588
chr5 77799521 77799532 FOXA1 JASPAR yes 63593589
chr5 77799521 77799536 FOXA1 JASPAR yes 63593590
chr5 77799522 77799534 FOXC2 JASPAR yes 63593591
chr5 77799522 77799542 RREB1 JASPAR yes 63593592
chr5 77799523 77799535 FOXI1 JASPAR yes 63593593
chr5 77799523 77799543 RREB1 JASPAR yes 63593594
Genes associated with rs397755828[chr5:77799523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More