EnhancerDB
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  3. rs397768413[chr17:55544150]
Enhancers that have rs397768413[chr17:55544150]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397768413[chr17:55544150]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55544137 55544152 FOXP1 JASPAR yes 54957864
chr17 55544142 55544154 FOXC2 JASPAR yes 54957865
chr17 55544142 55544156 ONECUT1 JASPAR yes 54957866
chr17 55544142 55544156 ONECUT2 JASPAR yes 54957867
chr17 55544142 55544156 ONECUT3 JASPAR yes 54957868
chr17 55544143 55544153 CUX1 JASPAR yes 54957869
chr17 55544143 55544153 CUX2 JASPAR yes 54957870
chr17 55544143 55544154 FOXB1 JASPAR yes 54957871
chr17 55544143 55544154 FOXC1 JASPAR yes 54957872
Genes associated with rs397768413[chr17:55544150], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More