EnhancerDB
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  3. rs397771532[chr15:42233792]
Enhancers that have rs397771532[chr15:42233792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397771532[chr15:42233792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42233774 42233795 IRF1 JASPAR yes 23008156
chr15 42233775 42233795 RREB1 JASPAR yes 23008158
chr15 42233775 42233796 IRF1 JASPAR yes 23008159
chr15 42233777 42233792 FOXP1 JASPAR yes 23008160
chr15 42233780 42233795 FOXP1 JASPAR yes 23008161
chr15 42233780 42233800 RREB1 JASPAR yes 23008162
chr15 42233780 42233801 IRF1 JASPAR yes 23008163
chr15 42233781 42233802 IRF1 JASPAR yes 23008164
chr15 42233782 42233797 FOXP1 JASPAR yes 23008165
chr15 42233786 42233807 IRF1 JASPAR yes 23008166
chr15 42233787 42233793 TCF4 TRANSFAC yes 23008167
chr15 42233787 42233802 FOXP1 JASPAR yes 23008168
chr15 42233788 42233799 FOXP2 JASPAR yes 23008169
chr15 42233788 42233800 FOXC2 JASPAR yes 23008170
chr15 42233788 42233803 STAT2 JASPAR yes 23008171
chr15 42233792 42233807 FOXP1 JASPAR yes 23008172
Genes associated with rs397771532[chr15:42233792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More