EnhancerDB
  1. Home
  2. SNP
  3. rs397778772[chr1:225786242]
Enhancers that have rs397778772[chr1:225786242]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs397778772[chr1:225786242]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225786230 225786246 SOX8 JASPAR yes 35753190
Genes associated with rs397778772[chr1:225786242], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More