EnhancerDB
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  3. rs397791026[chr1:19770655]
Enhancers that have rs397791026[chr1:19770655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397791026[chr1:19770655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19770649 19770664 FOXP1 JASPAR yes 27191007
chr1 19770650 19770665 FOXP1 JASPAR yes 27191008
chr1 19770651 19770656 ETS2 TRANSFAC yes 27191009
Genes associated with rs397791026[chr1:19770655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More