EnhancerDB
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  3. rs397805180[chr12:125239645]
Enhancers that have rs397805180[chr12:125239645]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125239604 125239956 vista15336
VISTA
Transcript factors that have rs397805180[chr12:125239645]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125239631 125239645 EBF1 JASPAR yes 82498097
chr12 125239631 125239645 EBF1 JASPAR yes 124418107
chr12 125239632 125239647 TFAP2C JASPAR yes 82498098
chr12 125239632 125239647 TFAP2C JASPAR yes 124418108
Genes associated with rs397805180[chr12:125239645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More