EnhancerDB
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  3. rs397805879[chr2:38673292]
Enhancers that have rs397805879[chr2:38673292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs397805879[chr2:38673292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38673286 38673307 IRF1 JASPAR yes 73141830
chr2 38673287 38673302 FOXP1 JASPAR yes 73141831
chr2 38673289 38673304 FOXP1 JASPAR yes 73141832
chr2 38673292 38673307 FOXP1 JASPAR yes 73141833
Genes associated with rs397805879[chr2:38673292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More