EnhancerDB
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  3. rs397825571[chr1:154399395]
Enhancers that have rs397825571[chr1:154399395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397825571[chr1:154399395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154399389 154399410 IRF1 JASPAR yes 32291549
chr1 154399390 154399411 IRF1 JASPAR yes 32291550
chr1 154399394 154399409 FOXP1 JASPAR yes 32291551
chr1 154399395 154399410 FOXP1 JASPAR yes 32291552
Genes associated with rs397825571[chr1:154399395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More