EnhancerDB
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  3. rs397827815[chr1:19754134]
Enhancers that have rs397827815[chr1:19754134]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397827815[chr1:19754134]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19754125 19754134 PITX3 JASPAR yes 27188784
chr1 19754128 19754139 HOXA10 JASPAR yes 27188785
chr1 19754129 19754139 HOXD13 JASPAR yes 27188786
chr1 19754129 19754150 IRF1 JASPAR yes 27188787
chr1 19754133 19754148 PRDM1 JASPAR yes 27188788
Genes associated with rs397827815[chr1:19754134], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More