EnhancerDB
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  3. rs397857010[chr17:56000240]
Enhancers that have rs397857010[chr17:56000240]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397857010[chr17:56000240]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56000228 56000249 IRF1 JASPAR yes 54999786
chr17 56000230 56000245 PRDM1 JASPAR yes 54999787
chr17 56000230 56000251 IRF1 JASPAR yes 54999788
chr17 56000232 56000253 IRF1 JASPAR yes 54999789
chr17 56000234 56000255 IRF1 JASPAR yes 54999790
chr17 56000235 56000250 FOXP1 JASPAR yes 54999791
chr17 56000236 56000251 STAT2 JASPAR yes 54999792
chr17 56000237 56000252 FOXP1 JASPAR yes 54999793
chr17 56000239 56000254 FOXP1 JASPAR yes 54999794
chr17 56000240 56000255 FOXP1 JASPAR yes 54999795
Genes associated with rs397857010[chr17:56000240], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More