EnhancerDB
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  3. rs397857266[chr17:878053]
Enhancers that have rs397857266[chr17:878053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs397857266[chr17:878053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 878045 878060 MEF2A JASPAR yes 52647875
chr17 878046 878061 FOXP1 JASPAR yes 52647876
chr17 878046 878061 MEF2C JASPAR yes 52647877
chr17 878047 878059 FOXC2 JASPAR yes 52647878
chr17 878047 878059 MEF2A JASPAR yes 52647879
chr17 878047 878059 MEF2B JASPAR yes 52647880
chr17 878047 878059 MEF2D JASPAR yes 52647881
chr17 878048 878058 MEF2A JASPAR yes 52647882
chr17 878049 878053 YY1 TRANSFAC yes 52647883
chr17 878050 878066 POU4F3 JASPAR yes 52647884
chr17 878051 878066 FOXA1 JASPAR yes 52647885
chr17 878052 878064 FOXI1 JASPAR yes 52647886
chr17 878052 878066 POU4F1 JASPAR yes 52647887
chr17 878052 878067 FOXP1 JASPAR yes 52647888
chr17 878052 878067 HNF1A JASPAR yes 52647889
chr17 878053 878065 FOXC2 JASPAR yes 52647890
chr17 878053 878067 ONECUT2 JASPAR yes 52647891
chr17 878053 878067 ONECUT3 JASPAR yes 52647892
Genes associated with rs397857266[chr17:878053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More