EnhancerDB
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  3. rs397857701[chr17:2787084]
Enhancers that have rs397857701[chr17:2787084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs397857701[chr17:2787084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2787076 2787091 TFAP2A JASPAR yes 52781951
chr17 2787078 2787093 TFAP2A JASPAR yes 52781952
chr17 2787078 2787093 TFAP2C JASPAR yes 52781953
chr17 2787079 2787090 TFAP2A JASPAR yes 52781954
chr17 2787079 2787091 INSM1 JASPAR yes 52781955
chr17 2787080 2787089 TFAP2A JASPAR yes 52781956
chr17 2787084 2787089 SP1 TRANSFAC yes 52781957
Genes associated with rs397857701[chr17:2787084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More