EnhancerDB
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  3. rs397860189[chr1:1786597]
Enhancers that have rs397860189[chr1:1786597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397860189[chr1:1786597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1786594 1786609 FOXP1 JASPAR yes 26207348
chr1 1786595 1786610 FOXP1 JASPAR yes 26207349
chr1 1786596 1786611 FOXP1 JASPAR yes 26207350
chr1 1786596 1786617 IRF1 JASPAR yes 26207351
chr1 1786597 1786612 FOXP1 JASPAR yes 26207352
Genes associated with rs397860189[chr1:1786597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More