EnhancerDB
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  3. rs397862454[chr1:154398996]
Enhancers that have rs397862454[chr1:154398996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397862454[chr1:154398996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154398993 154399008 FOXP1 JASPAR yes 32291461
chr1 154398994 154399009 FOXP1 JASPAR yes 32291462
chr1 154398995 154399010 FOXP1 JASPAR yes 32291463
chr1 154398995 154399016 IRF1 JASPAR yes 32291464
chr1 154398996 154399011 FOXP1 JASPAR yes 32291465
chr1 154398996 154399017 IRF1 JASPAR yes 32291466
Genes associated with rs397862454[chr1:154398996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More