EnhancerDB
  1. Home
  2. SNP
  3. rs397869554[chr2:102329365]
Enhancers that have rs397869554[chr2:102329365]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397869554[chr2:102329365]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102329359 102329380 IRF1 JASPAR yes 75829690
chr2 102329361 102329382 IRF1 JASPAR yes 75829691
chr2 102329362 102329377 FOXP1 JASPAR yes 75829692
chr2 102329362 102329383 IRF1 JASPAR yes 75829693
chr2 102329364 102329379 FOXP1 JASPAR yes 75829694
chr2 102329365 102329380 FOXP1 JASPAR yes 75829695
Genes associated with rs397869554[chr2:102329365], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More