EnhancerDB
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  3. rs397873003[chr2:38665457]
Enhancers that have rs397873003[chr2:38665457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs397873003[chr2:38665457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38665452 38665467 MEF2C JASPAR yes 73140650
chr2 38665452 38665473 IRF1 JASPAR yes 73140651
chr2 38665454 38665469 FOXP1 JASPAR yes 73140652
chr2 38665455 38665470 FOXP1 JASPAR yes 73140653
chr2 38665456 38665462 TBP TRANSFAC yes 73140654
chr2 38665456 38665471 FOXP1 JASPAR yes 73140655
chr2 38665456 38665477 IRF1 JASPAR yes 73140656
chr2 38665457 38665472 FOXP1 JASPAR yes 73140657
chr2 38665457 38665478 IRF1 JASPAR yes 73140658
Genes associated with rs397873003[chr2:38665457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More