EnhancerDB
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  3. rs397938017[chr1:171391267]
Enhancers that have rs397938017[chr1:171391267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs397938017[chr1:171391267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171391246 171391267 ZNF263 JASPAR yes 33078667
chr1 171391254 171391275 ZNF263 JASPAR yes 33078670
chr1 171391255 171391276 ZNF263 JASPAR yes 33078671
chr1 171391257 171391267 SP1 JASPAR yes 33078673
chr1 171391257 171391267 SP1 TRANSFAC yes 33078674
chr1 171391257 171391277 RREB1 JASPAR yes 33078675
chr1 171391261 171391276 NR2C2 JASPAR yes 33078676
chr1 171391262 171391268 SP1 TRANSFAC yes 33078677
chr1 171391262 171391272 SP1 JASPAR yes 33078678
chr1 171391263 171391273 SP1 JASPAR yes 33078679
chr1 171391265 171391275 SP1 JASPAR yes 33078680
chr1 171391265 171391275 ZNF740 JASPAR yes 33078681
chr1 171391266 171391276 ZNF740 JASPAR yes 33078682
chr1 171391267 171391277 ZNF740 JASPAR yes 33078683
Genes associated with rs397938017[chr1:171391267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More